PhylTools 1.3
Phyltools is a freeware utilities package that works with the phylogenetic inference package Phylip. PhylTools will read data sets containing up to 1000 OTU's and 5000 characters. PhylTools is intended for the processing and distance calculation ...
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Phylip Download
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1Freeware
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2NimbleTree 2.6
This program accepts sequence alignments in many different formats, and makes it easy to generate a tree using PHYLIP or PAUP* (if available on the workstation).Freeware -
3Unipro UGENE 1.1
Main features: Integrated tools -Multiple sequence alignment using MUSCLE 3, KAlign, Clustal; -HMM profiles build and search, based on the source of HMMER 2 and HMMER 3; -PCR Primers design using Primer 3; -Cloning in silico capabilities; -Queries to NCBI BLAST and CDD databases; -Protein secondary structure prediction using GOR IV and PSIPRED; -Phylogenetic analysis with Phylip; -Search for restriction ... -
4DAMBE 5.2
DAMBE is a versatile software workbench for laboratories doing research in molecular biology and evolution. Features: Sequence alignment ¨ General sequence alignment with nucleotide and amino acid sequences ¨ Aligning protein-coding nucleotide ...Freeware -
5Unipro UGENE for Mac 1.11.4
Features: Integrated tools Multiple sequence alignment using MUSCLE 3, KAlign, Clustal; HMM profiles build and search, based on the source of HMMER 2 and HMMER 3; PCR Primers design using Primer 3; Cloning in silico capabilities; Queries to NCBI BLAST and CDD databases; Protein secondary structure prediction using GOR IV and PSIPRED; Phylogenetic analysis with Phylip; Search for restriction ...Freeware -
6Unipro UGENE for Linux 1.11.4
Features: Integrated tools Multiple sequence alignment using MUSCLE 3, KAlign, Clustal; HMM profiles build and search, based on the source of HMMER 2 and HMMER 3; PCR Primers design using Primer 3; Cloning in silico capabilities; Queries to NCBI BLAST and CDD databases; Protein secondary structure prediction using GOR IV and PSIPRED; Phylogenetic analysis with Phylip; Search for restriction ...Freeware -
7Unipro UGENE 64-bit 1.11.4
Features: Integrated tools Multiple sequence alignment using MUSCLE 3, KAlign, Clustal; HMM profiles build and search, based on the source of HMMER 2 and HMMER 3; PCR Primers design using Primer 3; Cloning in silico capabilities; Queries to NCBI BLAST and CDD databases; Protein secondary structure prediction using GOR IV and PSIPRED; Phylogenetic analysis with Phylip; Search for restriction ...Freeware -
8DNATREE for Mac OS X 1.3
DNATREE was created by combining two simulation programs used by our laboratory, together with code from the PHYLIP program DNAMOVE, the interactive DNA parsimony program. The simulation programs are versions of the ones used in the extensive simulations ...Freeware -
9DNATREE for Linux 1.3
DNATREE was created by combining two simulation programs used by our laboratory, together with code from the PHYLIP program DNAMOVE, the interactive DNA parsimony program. The simulation programs are versions of the ones used in the extensive simulations ...Freeware